Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955452.1_cds_XP_016493936.1_83995
CDS Infomation

[gene=LOC107813217] [db_xref=GeneID:107813217] [protein=2-oxoglutarate dehydrogenase, mitochondrial-like] [protein_id=XP_016493936.1] [location=join(23110..24657,24861..25087,25171..25503,26244..26490,27072..27200,27278..27493,27935..28058,28337..28575)] [gbkey=CDS]
Sequence

ATGGCGTGGTTTAGAGCTGGGTCGAGTGTAGCAAAGCTTGCTATTAGAAGGGCTCTTTCG
CAGGGTGGTTCTTACGTCCCAAGAACTCGCGTTCTTCCATCACAAGGTCGACTTTTTCAC
ACCACAGTTTTCAGGCCGAAGGCACAAGCTGCTCCTGTCCCTAGACCAGTACCACTTTCT
AAGTTGACTGACAGTTTCTTAGATGGAACGAGCAGCGTCTACCTTGAGGAGCTTCAGCGA
GCCTGGGAGCAAGACCCAAATAGTGTTGACGAGTCATGGGATAACTTCTTTAGGAATTTT
GTTGGACAAGCTGCCACGTCGCCTGGGATTTCAGGCCAGACGATCCAAGAGAGTATGCGT
CTTCTGTTGCTCGTGAGAGCTTATCAGGTCAATGGTCACATGAAAGCGAAACTGGATCCA
TTAGGTTTGGAAGAGAGGGAAATTCCTGATGATTTGGATCCAGCATTATATGGGTTCACT
GAAGCTGATCTTGATAGAGAGTTCTTCCTTGGTGTTTGGAGGATGTCTGGATTCTTGTCT
GAGAATCGTCCCGTGCAAACTTTGAGGGCAATATTAACACGGCTTGAGCAGGCTTATTGT
GGAAGCATTGGCTACGAGTACATGCATATTTCTGATCGTGATAAATGTAATTGGTTGAGA
GAACGGATTGAAACCCCAACATCTATGGAGTACAATCGTGAGCGGCGTGAAGTTATTCTT
GACCGGCTGATGTGGAGTACACAGTTTGAGAACTTCTTGGCCACAAAGTGGATGGCAGCC
AAGAGATTTGGGCTTGAAGGTTGTGAGACCTTGATTCCTGGCATGAAGGAGATGTTTGAC
AGGGCAGCAGATCTTGGAGTTGAGAGCATAGTTATTGGGATGCCGCATAGAGGAAGATTA
AATGTTTTAGGTAATGTTGTTCGAAAGCCACTAAAGCAGATTTTCAGTGAGTTTAGCGGC
GGCACAAAACCTGGGGATGAAGCTGGTTATGTGGGAACTGGTGATGTTAAGTATCACTTG
GGAACTTCTTATGATCGGCCTACTAGGGGTGGGAAGAGAATTCATCTATCTTTGGTTGCA
AATCCAAGCCACTTGGAAGCTGTGGATCCGGTTGTTATTGGAAAAACTAGAGCAAAGCAA
TATTATAGTAATGACGTGGATAGAACAAAGAACATGGGTATTTTGCTCCATGGTGATGGT
AGTTTTGCAGGACAAGGTGTTGTCTATGAGACATTGCATCTGAGCGCTCTTCCAAATTAC
TCGACTGGTGGGACCATTCACATTGTGGTTAATAATCAAGTGGCGTTCACTACTGATCCA
AGGGCTGGAAGATCATCTCAGTACTGTACTGACGTCGCAAAGGCTTTGAATGCTCCAATT
TTCCATGTCAATGGTGATGATGTTGAGGCGGTTGCTCATGTGTGTGAACTTGCTGCAGAA
TGGCGCCAGAAATTCCACTCAGATGTTGTGGTTGATATTGTCTGTTATCGTCGTTTTGGA
CACAATGAAATTGATGAACCGTCCTTCACCCAGCCTAAAATGTATAAGATCATCAGAAAT
CATCCTTCATCGTTGGAGATCTATCAAAACAAACTCCTAAAATCCGGTCAGGTGACAAAA
GATGACGTGGAAAAGATACATAACAAGATTAATAGAATACTTAATGAAGAGTTCGTTGCT
AGTAAAGATTATGTCCCTCAAAAAAGAGATTGGCTTTCTGCCTTTTGGGCTGGGTTTAAG
TCTCCTTCACAGCTTTCACGTGTTCGAAACACTGGTGTCAAACCCGAGATCTTGAAGAAT
GTTGGGAAAGCAATCACAACGCTTCCAGATGATTTTAAGCCTCACAGGGCAGTGAAACGG
ATTTTTGATGATCGCCGAAAAATGATTGAGACAGGGGAGGGTGTTGACTGGGCAGTTGGA
GAAGCACTTGCTTTTGCAACATTGCTTGTGGAAGGTAATCATGTTAGGTTGAGTGGTCAG
GATGTTGAGAGAGGAACTTTCAGTCACAGACATTCTGTTCTTCATGATCAGGAGACAGGG
GTACAGTACTGTCCTCTTGATCATGTTATGATGAACCAAAATGAAGAGATGTTCACCGTG
AGCAACAGCTCCCTTTCAGAGTTTGGTGTTCTGGGATTTGAATTGGGTTATTCAATGGAA
AACCCAAATTCATTGGTACTTTGGGAAGCACAATTTGGTGATTTCGCCAATGGAGCTCAA
GTAATATTTGACCAGTTTGTGAGCAGTGGAGAGGCGAAGTGGTTGCGCCAGTCTGGGTTG
GTTGTGCTTTTGCCACATGGTTATGATGGCCAGGGTCCTGAGCATTCAAGTGGACGTTTG
GAACGTTTCCTCCAGATGAGTGATGACAACCCATTTGTTATCCCGGAGATGGAACCTACA
CTACGAAAGCAGATTCAGGAATGTAATTGGCAGGTGGTTAATGTAACAACTCCTGCAAAT
TATTTCCATGTTTTGCGGCGTCAAATTCACAGAGATTTCCGTAAGCCTCTCATTGTGATG
GCCCCAAAGAACTTGCTTCGTCACAAAGAGTGCAAGTCAAATCTATCTGAGTTCGACGAT
GTCCAAGGCCACCCAGGTTTCGACAAACAAGGTACCAGGTTTAAGCGCCTGATAAAAGAT
CAGAATGACCACTCAGATCTTGAAGAGGGTATCGGGCGGCTGGTCCTTTGCTCAGGAAAG
ATCTATTATGAGCTTGACGAGGAAAGAAAGAAAGCCGATGGGAAAGATGTTGCTATCTGT
CGGGTGGAACAGCTTTGTCCTTTCCCATACGACCTTATCCAGCGTGAATTGAAGCGATAT
CCAAATGCAGAGATAGTTTGGTGCCAAGAGGAGCCGATGAACATGGGTGCTTTCCATTAC
ATTGCACCACGCCTTTGTACTGCCATGAAGTCACTAGGCAGAGGTAACATGGATGACATC
AAGTATGTCGGTCGTGCTCCTTCTGCCGCCACAGCCACTGGGTTCTACCAAGTTCATGTG
AAAGAGCAGTCTGAGCTTGTGCAGAAAGCCTTGCAGCGTGATCCCGTTAACAATCCGTTC
TGA

Peptide Sequence

PEP ID

XP_016493936.1
PEP Infomation

PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Nicotiana tabacum]
Sequence

MAWFRAGSSVAKLAIRRALSQGGSYVPRTRVLPSQGRLFHTTVFRPKAQAAPVPRPVPLS
KLTDSFLDGTSSVYLEELQRAWEQDPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPALYGFTEADLDREFFLGVWRMSGFLS
ENRPVQTLRAILTRLEQAYCGSIGYEYMHISDRDKCNWLRERIETPTSMEYNRERREVIL
DRLMWSTQFENFLATKWMAAKRFGLEGCETLIPGMKEMFDRAADLGVESIVIGMPHRGRL
NVLGNVVRKPLKQIFSEFSGGTKPGDEAGYVGTGDVKYHLGTSYDRPTRGGKRIHLSLVA
NPSHLEAVDPVVIGKTRAKQYYSNDVDRTKNMGILLHGDGSFAGQGVVYETLHLSALPNY
STGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDVEAVAHVCELAAE
WRQKFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHPSSLEIYQNKLLKSGQVTK
DDVEKIHNKINRILNEEFVASKDYVPQKRDWLSAFWAGFKSPSQLSRVRNTGVKPEILKN
VGKAITTLPDDFKPHRAVKRIFDDRRKMIETGEGVDWAVGEALAFATLLVEGNHVRLSGQ
DVERGTFSHRHSVLHDQETGVQYCPLDHVMMNQNEEMFTVSNSSLSEFGVLGFELGYSME
NPNSLVLWEAQFGDFANGAQVIFDQFVSSGEAKWLRQSGLVVLLPHGYDGQGPEHSSGRL
ERFLQMSDDNPFVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHRDFRKPLIVM
APKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIGRLVLCSGK
IYYELDEERKKADGKDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAFHY
IAPRLCTAMKSLGRGNMDDIKYVGRAPSAATATGFYQVHVKEQSELVQKALQRDPVNNPF

Transcript Sequence

Gene sequence data has not been registered.